STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK73179.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
KRK73178.1
Hypothetical protein.
 
     0.790
KRK73177.1
Large subunit terminase.
 
     0.769
KRK73190.1
Hypothetical protein.
 
     0.675
KRK73180.1
Scaffold protein.
       0.612
KRK73176.1
Phage-related terminase small subunit.
 
     0.586
KRK73181.1
Major head protein.
       0.558
KRK73183.1
DNA packaging protein.
       0.472
KRK73182.1
Conserved bacteriophage protein.
       0.425
KRK73185.1
Hypothetical protein.
       0.422
KRK73187.1
Major tail protein.
       0.401
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.