STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK73193.1LPS biosynthesis protein. (565 aa)    
Predicted Functional Partners:
KRK71688.1
Hydrolase.
  
  
  0.833
KRK73192.1
Hypothetical protein.
  
    0.787
KRK73190.1
Hypothetical protein.
  
    0.629
KRK72600.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.582
KRK73191.1
Minor tail protein.
       0.581
KRK73189.1
Hypothetical protein.
       0.563
KRK72664.1
PA-phosphatase-like phosphoesterase.
  
 0.499
KRK70855.1
Alpha-glycerophosphate oxidase.
 
 
 0.494
KRK70343.1
Acetaldehyde dehydrogenase (acetylating); In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.487
KRK72457.1
Transcription regulator.
 
 
 0.470
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
Server load: low (30%) [HD]