STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK73420.1Phage-related tail component. (496 aa)    
Predicted Functional Partners:
KRK73421.1
Minor tail protein.
  
    0.903
KRK73192.1
Hypothetical protein.
  
   0.846
KRK70919.1
Metallophosphoesterase.
  
   0.812
KRK73419.1
Host-specificity protein.
  
    0.806
KRK73373.1
Lipase acylhydrolase.
  
   0.742
KRK74102.1
Hypothetical protein.
  
   0.742
KRK74118.1
Hypothetical protein.
  
   0.732
KRK73881.1
Hypothetical protein.
  
   0.732
KRK74099.1
Hypothetical protein.
   
   0.611
KRK74103.1
Mucus binding protein.
   
   0.611
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.