STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK73424.1Major tail protein. (207 aa)    
Predicted Functional Partners:
KRK73426.1
Head-tail joining protein.
 
     0.957
KRK73425.1
Tail component protein.
 
     0.952
KRK73421.1
Minor tail protein.
 
     0.878
KRK73431.1
Portal protein.
 
     0.872
KRK73430.1
ClpP family protease; Belongs to the peptidase S14 family.
 
     0.859
KRK73433.1
Terminase large subunit.
 
     0.856
KRK73429.1
Phage phi-C31 gp36 major capsid family protein.
 
     0.833
KRK73427.1
Hypothetical protein.
       0.757
KRK73423.1
Hypothetical protein.
       0.549
KRK73422.1
Hypothetical protein.
       0.525
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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