Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRK72600.1 | KRK72601.1 | FD02_GL001573 | FD02_GL001574 | Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Xre-like DNA-binding protein. | 0.938 |
| KRK72601.1 | KRK72600.1 | FD02_GL001574 | FD02_GL001573 | Xre-like DNA-binding protein. | Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.938 |
| KRK72601.1 | KRK73224.1 | FD02_GL001574 | FD02_GL001080 | Xre-like DNA-binding protein. | Rod shape-determining protein MreB. | 0.949 |
| KRK72601.1 | KRK74132.1 | FD02_GL001574 | FD02_GL000726 | Xre-like DNA-binding protein. | Rod shape-determining protein MreB. | 0.945 |
| KRK72601.1 | rplI | FD02_GL001574 | FD02_GL001664 | Xre-like DNA-binding protein. | Ribosomal protein L9; Binds to the 23S rRNA. | 0.788 |
| KRK72601.1 | rplM | FD02_GL001574 | FD02_GL000309 | Xre-like DNA-binding protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.790 |
| KRK72601.1 | rplV | FD02_GL001574 | FD02_GL000347 | Xre-like DNA-binding protein. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.857 |
| KRK72601.1 | rplW | FD02_GL001574 | FD02_GL000350 | Xre-like DNA-binding protein. | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.857 |
| KRK72601.1 | rpmC | FD02_GL001574 | FD02_GL000344 | Xre-like DNA-binding protein. | Hypothetical protein; Belongs to the universal ribosomal protein uL29 family. | 0.857 |
| KRK72601.1 | secA | FD02_GL001574 | FD02_GL000262 | Xre-like DNA-binding protein. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.814 |
| KRK72601.1 | secA-2 | FD02_GL001574 | FD02_GL001563 | Xre-like DNA-binding protein. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.814 |
| KRK73224.1 | KRK72601.1 | FD02_GL001080 | FD02_GL001574 | Rod shape-determining protein MreB. | Xre-like DNA-binding protein. | 0.949 |
| KRK74132.1 | KRK72601.1 | FD02_GL000726 | FD02_GL001574 | Rod shape-determining protein MreB. | Xre-like DNA-binding protein. | 0.945 |
| rplI | KRK72601.1 | FD02_GL001664 | FD02_GL001574 | Ribosomal protein L9; Binds to the 23S rRNA. | Xre-like DNA-binding protein. | 0.788 |
| rplI | rplM | FD02_GL001664 | FD02_GL000309 | Ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
| rplI | rplV | FD02_GL001664 | FD02_GL000347 | Ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
| rplI | rplW | FD02_GL001664 | FD02_GL000350 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
| rplI | rpmC | FD02_GL001664 | FD02_GL000344 | Ribosomal protein L9; Binds to the 23S rRNA. | Hypothetical protein; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
| rplI | secA | FD02_GL001664 | FD02_GL000262 | Ribosomal protein L9; Binds to the 23S rRNA. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.733 |
| rplI | secA-2 | FD02_GL001664 | FD02_GL001563 | Ribosomal protein L9; Binds to the 23S rRNA. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.733 |
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