STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK73820.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
KRK73819.1
Hypothetical protein.
 
     0.875
KRK71062.1
Sucrose-specific PTS system IIBC component.
   
 
 0.843
KRK73997.1
PTS system beta-glucoside-specific EIIBCA component.
   
 
 0.843
KRK73818.1
Hypothetical protein.
 
     0.604
KRK73881.1
Hypothetical protein.
  
     0.591
KRK74238.1
Hypothetical protein.
  
     0.566
KRK73882.1
Hypothetical protein.
  
     0.563
KRK72657.1
Hypothetical protein.
  
     0.543
KRK74256.1
Hypothetical protein.
  
     0.487
KRK73879.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.