STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK73971.1Signal transduction histidine kinase. (632 aa)    
Predicted Functional Partners:
KRK73970.1
Response regulator.
 0.998
KRK72585.1
Response regulator.
 0.929
KRK74046.1
Two-component response regulator.
 0.929
KRK73972.1
Hypothetical protein.
 
  
 0.915
KRK74212.1
DNA-binding response regulator.
 0.913
KRK73198.1
DNA-binding response regulator.
 0.913
KRK73973.1
Hypothetical protein.
 
  
 0.886
KRK73959.1
Response regulator.
 0.862
KRK73974.1
Metal-dependent hydrolase of the beta-lactamase superfamily I.
  
  
 0.838
KRK71815.1
DNA-binding response regulator, OmpR family (Rec-wHTH domains).
 0.824
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.