STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK71765.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
KRK70456.1
Hypothetical protein; Belongs to the PHP hydrolase family. HisK subfamily.
  
     0.634
KRK71764.1
Lyzozyme M1.
       0.567
KRK74130.1
Transcriptional regulator.
  
     0.556
KRK72458.1
Hypothetical protein.
  
     0.549
KRK74400.1
Acetyltransferase.
  
     0.502
KRK70437.1
Glycopeptide antibiotics resistance protein.
 
     0.493
KRK71817.1
Antimicrobial peptide ABC transporter permease.
 
    0.480
KRK71772.1
Hypothetical protein.
  
     0.443
KRK71763.1
Hypothetical protein.
       0.425
KRK70928.1
Hypothetical protein.
  
    0.424
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.