STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK71767.1Dehydrogenase related protein. (327 aa)    
Predicted Functional Partners:
KRK71768.1
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
     
 0.813
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.768
KRK70454.1
Sir2 family NAD-dependent protein deacetylase.
    
  0.644
KRK71766.1
Hypothetical protein.
       0.623
KRK71792.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.579
KRK72479.1
Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.565
KRK73939.1
2-dehydro-3-deoxygluconokinase.
  
 
 0.558
KRK70398.1
Hypothetical protein.
  
 
 0.544
KRK73937.1
AP endonuclease, family 2.
  
 
 0.544
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
   0.523
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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