STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK71778.1Hypothetical protein; Belongs to the HesB/IscA family. (116 aa)    
Predicted Functional Partners:
KRK71777.1
Deoxynucleoside kinase.
       0.757
KRK71776.1
Nicotinamide mononucleotide transporter.
       0.712
KRK73354.1
Hypothetical protein.
  
     0.481
KRK70207.1
Hypothetical protein.
  
     0.443
KRK71779.1
Binding-protein-dependent transport systems inner membrane component.
       0.436
KRK71775.1
Permease of the major facilitator superfamily protein.
       0.426
KRK71780.1
ABC-type nitrate sulfonate bicarbonate transport system, periplasmic component.
       0.426
KRK71781.1
ABC-type nitrate sulfonate bicarbonate transport system, ATPase component.
       0.421
KRK71782.1
Mg-dependent DNase TatD.
       0.421
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.