STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP84599.1NADPH:quinone reductase; Gene_19; identified by MetaGeneAnnotator; putative. (307 aa)    
Predicted Functional Partners:
BAP84598.1
Pyruvate oxidase; PYR/PP interface [polypeptide binding]; Pyrimidine (PYR) binding domain of POX; cd07039; TPP binding site [chemical binding]; TPP-binding site [chemical binding]; Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions. POX decarboxylates..; cd02014; Thiamine pyrophosphate enzyme, central domain; pfam00205; dimer interface [polypeptide binding]; gene_18; identified by MetaGeneAnnotator; putati [...]
 
 
 0.840
BAP86625.1
Zinc-binding dehydrogenase; Gene_2045; identified by MetaGeneAnnotator; putative; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
     0.752
BAP84749.1
KEGG: sgo:SGO_0841 oxidoreductase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SMART: Polyketide synthase, enoylreductase; NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]; COG0604; Quinone oxidoreductase (QOR); cd08243; alcohol dehydrogenase GroES domain-containing protein [Lactobacillus buchneri NRRL B- 30929]; gene_169; identified by MetaGeneAnnotator; putative; putative NAD(P) binding site [chemical binding].
 
     0.639
BAP84596.1
Major facilitator superfamily transporter; Gene_16; identified by MetaGeneAnnotator; putative.
       0.458
BAP84597.1
Hypothetical protein; Gene_17; identified by MetaGeneAnnotator; putative.
       0.458
BAP86485.1
2,6-dichloro-p-hydroquinone 1,2-dioxygenase; Gene_1905; identified by MetaGeneAnnotator; putative.
 
 
 0.421
BAP85794.1
Hypothetical protein; Gene_1214; identified by MetaGeneAnnotator; putative.
  
     0.407
Your Current Organism:
Lactobacillus hokkaidonensis
NCBI taxonomy Id: 1291742
Other names: L. hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis LOOC260, Lactobacillus sp. LOOC260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.