STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP84653.1Hypothetical protein; Psort location: Extracellular, score: 9.22; Uncharacterized protein conserved in bacteria [Function unknown]; conserved domain protein [Enterococcus faecalis TX1342]; gene_73; identified by MetaGeneAnnotator; putative. (144 aa)    
Predicted Functional Partners:
BAP85348.1
Hypothetical protein; Gene_768; identified by MetaGeneAnnotator; putative.
  
    0.599
BAP84736.1
Hypothetical protein; Gene_156; identified by MetaGeneAnnotator; putative; Belongs to the UPF0337 (CsbD) family.
   
    0.575
BAP84654.1
DNA-binding protein; Gene_74; identified by MetaGeneAnnotator; putative.
       0.513
BAP85333.1
Cell surface protein; Gene_753; identified by MetaGeneAnnotator; putative; partial.
  
     0.470
BAP84748.1
Transcriptional regulator; Gene_168; identified by MetaGeneAnnotator; putative.
  
     0.462
BAP84642.1
Permease; Pfam: PF01925; InterPro: IPR002781; Sulfite exporter TauE/SafE; pfam01925; gene_62; identified by MetaGeneAnnotator; putative; membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305].
 
     0.461
BAP86699.1
OsmC/Ohr family protein; Gene_2119; identified by MetaGeneAnnotator; putative.
  
    0.454
BAP84987.1
Dipeptide/tripeptide permease [Amino acid transport and metabolism]; COG3104; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of..; cd06174; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; cl11420; [...]
   
    0.426
BAP85013.1
Acetyltransferase; Gene_433; identified by MetaGeneAnnotator; putative.
   
    0.426
ribD
Dihydrofolate reductase; Gene_447; identified by MetaGeneAnnotator; putative.
   
    0.426
Your Current Organism:
Lactobacillus hokkaidonensis
NCBI taxonomy Id: 1291742
Other names: L. hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis LOOC260, Lactobacillus sp. LOOC260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.