STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP84935.1Hypothetical protein; Gene_355; identified by MetaGeneAnnotator; putative. (317 aa)    
Predicted Functional Partners:
BAP86148.1
Hypothetical protein zj316_0881 [Lactobacillus plantarum ZJ316]; gene_1568; identified by MetaGeneAnnotator; putative.
  
     0.741
BAP86502.1
SAM-dependent methyltransferase [Lactobacillus reuteri MM2- 3]; Topoisomerase-primase domain. This is a nucleotidyl transferase/hydrolase domain found in type IA, type IIA and type IIB topoisomerases, bacterial DnaG-type primases, small primase-like proteins from bacteria and archaea, OLD family nucleases from..; cl00718; gene_1922; identified by MetaGeneAnnotator; putative; metal binding site [ion binding].
  
     0.730
BAP85723.1
Hypothetical protein zj316_1972 [Lactobacillus plantarum ZJ316]; gene_1143; identified by MetaGeneAnnotator; putative.
  
     0.718
BAP85898.1
Hypothetical protein; TPR motif; TPR repeat; pfam13414; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi; cd00189; Tetratricopeptide repeat; pfam13424; Tetratricopeptide repeat; pfam13432; binding surface; gene_1318; identified by MetaGeneAnnotator; putative; tetratricopeptide TPR_2 repeat protein [Lactobacillus reuteri MM2- 3].
  
     0.686
BAP84719.1
Hypothetical protein; Gene_139; identified by MetaGeneAnnotator; putative.
  
     0.663
BAP86501.1
Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; cd00093; gene_1921; identified by MetaGeneAnnotator; putative; non-specific DNA binding site [nucleotide binding]; salt bridge; sequence-specific DNA binding site [nucleotide binding]; transcriptional regulator [Lactobacillus coleohominis 101-4- CHN].
  
     0.646
BAP85885.1
Membrane protein; Gene_1305; identified by MetaGeneAnnotator; putative.
  
     0.645
BAP85861.1
Hypothetical protein; Gene_1281; identified by MetaGeneAnnotator; putative.
  
     0.643
BAP84933.1
Exopolyphosphatase; COG: COG0248; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; cl17037; exopolyphosphatase [Lactobacillus vaginalis ATCC 49540]; exopolyphosphatase; TIGR03706; gene_353; identified by MetaGeneAnnotator; putative.
 
     0.618
BAP85685.1
Hypothetical protein; Gene_1105; identified by MetaGeneAnnotator; putative.
  
     0.598
Your Current Organism:
Lactobacillus hokkaidonensis
NCBI taxonomy Id: 1291742
Other names: L. hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis LOOC260, Lactobacillus sp. LOOC260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.