STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP85075.1Deoxynucleoside kinases [Nucleotide transport and metabolism]; Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs). This family consists of various deoxynucleoside kinases including deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC 2.7.1; cd01673; Substrate specificity [chemical binding]; Substrate-binding site [chemical binding]; deoxyguanosine kinase [Lactobacillus fermentum 28-3- CHN]; gene_495; identified by MetaGeneAnnotator; putative. (213 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.820
BAP86439.1
Hypothetical protein; Gene_1859; identified by MetaGeneAnnotator; putative.
    
  0.726
BAP85829.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Gene_1249; identified by MetaGeneAnnotator; putative.
      0.671
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
 0.624
BAP86266.1
NmrA family protein; Gene_1686; identified by MetaGeneAnnotator; putative.
   
  0.606
BAP86278.1
NmrA family protein; COG: COG0702; Pfam: PF05368; InterPro: IPR016040; NAD(P) binding site [chemical binding]; NmrA family protein [Listeria grayi DSM 20601]; Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]; Rossmann-fold NAD(P)(+)-binding proteins; cl09931; gene_1698; identified by MetaGeneAnnotator; putative.
   
  0.606
BAP86327.1
Short-chain dehydrogenase; Gene_1747; identified by MetaGeneAnnotator; putative.
   
  0.606
BAP86569.1
Hypothetical protein; Gene_1989; identified by MetaGeneAnnotator; putative.
   
  0.606
BAP86056.1
Zinc protease; COG: COG0612; Pfam: PF00675,PF05193; InterPro: IPR011237; Insulinase (Peptidase family M16); pfam00675; M16C subfamily protease [Lactobacillus reuteri CF48- 3A]; Peptidase M16 inactive domain; pfam05193; Predicted Zn-dependent peptidases [General function prediction only]; COG0612; gene_1476; identified by MetaGeneAnnotator; putative.
   
 
 0.601
BAP86057.1
Peptidase M16; Gene_1477; identified by MetaGeneAnnotator; putative.
   
 
 0.601
Your Current Organism:
Lactobacillus hokkaidonensis
NCBI taxonomy Id: 1291742
Other names: L. hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis LOOC260, Lactobacillus sp. LOOC260
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