STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP85196.1Gluconokinase; ATP binding site [chemical binding]; Gluconate kinases; a subfamily of the FGGY family of carbohydrate kinases; cd07770; Gluconokinase [Oenococcus kitaharae DSM 17330]; N- and C-terminal domain interface [polypeptide binding]; carbohydrate binding site [chemical binding]; catalytic site [active]; gene_616; gluconate kinase, FGGY type; TIGR01314; identified by MetaGeneAnnotator; putative; metal binding site [ion binding]. (513 aa)    
Predicted Functional Partners:
pgd
6-phosphogluconate dehydrogenase [Pediococcus acidilactici 7_4]; 6-phosphogluconate dehydrogenase-like protein; Reviewed; Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]; COG1023; gene_1998; identified by MetaGeneAnnotator; putative.
 
 
 0.936
pgd-2
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.911
BAP86592.1
Gluconokinase; ATP binding site [chemical binding]; Gluconate kinases; a subfamily of the FGGY family of carbohydrate kinases; cd07770; N- and C-terminal domain interface [polypeptide binding]; carbohydrate binding site [chemical binding]; catalytic site [active]; gene_2012; gluconate kinase [Lactobacillus brevis ATCC 367]; gluconate kinase, FGGY type; TIGR01314; identified by MetaGeneAnnotator; putative; metal binding site [ion binding].
  
  
 
0.901
BAP84781.1
Hypothetical protein; Gene_201; identified by MetaGeneAnnotator; putative.
    
  0.900
BAP85930.1
6-phosphogluconolactonase; COG: COG2706; Lactonase, 7-bladed beta-propeller; pfam10282; carboxy-cis,cis-muconate cyclase [Lactobacillus vaginalis ATCC 49540]; gene_1350; identified by MetaGeneAnnotator; putative.
    
  0.900
BAP86595.1
Hypothetical protein; Gene_2015; identified by MetaGeneAnnotator; putative.
    
  0.900
BAP85197.1
Transcriptional regulator; Gene_617; identified by MetaGeneAnnotator; putative.
 
     0.568
BAP86630.1
Hypothetical protein; Gene_2050; identified by MetaGeneAnnotator; putative.
    0.528
BAP85195.1
GntP family permease; pfam02447; H+/gluconate symporter related permease [Lactobacillus brevis ATCC 367]; Na+-H+ antiporter family; cl15264; gene_615; identified by MetaGeneAnnotator; putative.
 
  
 0.478
BAP86151.1
GntP family permease; pfam02447; H+/gluconate symporter related permease [Lactobacillus brevis ATCC 367]; Na+-H+ antiporter family; cl15264; gene_1571; identified by MetaGeneAnnotator; putative.
 
  
 0.474
Your Current Organism:
Lactobacillus hokkaidonensis
NCBI taxonomy Id: 1291742
Other names: L. hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis LOOC260, Lactobacillus sp. LOOC260
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