STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP85491.1Hypothetical protein; Gene_911; identified by MetaGeneAnnotator; putative. (51 aa)    
Predicted Functional Partners:
BAP85490.1
Transcriptional regulator; Gene_910; identified by MetaGeneAnnotator; putative.
       0.693
BAP85492.1
Phage regulatory protein Rha (Phage_pRha); pfam09669; gene_912; identified by MetaGeneAnnotator; putative; phage anti-repressor protein, partial [Enterococcus faecalis DS5].
       0.648
BAP85493.1
Hypothetical protein; Gene_913; identified by MetaGeneAnnotator; putative.
       0.648
BAP85488.1
Hypothetical protein; Gene_908; identified by MetaGeneAnnotator; putative.
       0.478
BAP85489.1
Hypothetical protein; Gene_909; identified by MetaGeneAnnotator; putative.
       0.478
BAP85494.1
Hypothetical protein; Gene_914; identified by MetaGeneAnnotator; putative.
       0.442
Your Current Organism:
Lactobacillus hokkaidonensis
NCBI taxonomy Id: 1291742
Other names: L. hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis LOOC260, Lactobacillus sp. LOOC260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.