STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
BAP86433.1Glutamine ABC transporter permease; ABC-ATPase subunit interface; ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; COG4215; COG: COG0765; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and..; cd06261; amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540]; conserved gate region; dime [...] (217 aa)    
Predicted Functional Partners:
BAP86436.1
Arginine ABC transporter ATP-binding protein; ABC transporter signature motif; ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; COG1126; ATP binding site [chemical binding]; D-loop; H-loop/switch region; HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP..; cd03262; Q-loop/lid; Walker A/P-loop; Walker B; amino acid ABC transporter ATP-bin [...]
 0.998
BAP86435.1
Glutamine ABC transporter substrate-binding protein; Bacterial extracellular solute-binding proteins, family 3; pfam00497; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic..; cd00134; amino acid ABC transporter substrate-binding protein [Lactobacillus rhamnosus GG]; gene_1855; hinge residues; identified by MetaGeneAnnotator; putative; membrane-bound complex binding site; strain coident [...]
 0.997
BAP86434.1
Glutamine ABC transporter permease; ABC-ATPase subunit interface; ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; COG4215; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and..; cd06261; conserved gate region; dimer interface [polypeptide binding]; gene_1854; glutamine ABC transporter permease [Lactobacillus buchneri CD034]; identified by Met [...]
 
 
 
0.991
BAP86648.1
Amino acid ABC transporter substrate-binding component; Bacterial extracellular solute-binding proteins, family 3; pfam00497; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic..; cd00134; amino acid ABC transporter substrate-binding component [Lactobacillus coleohominis 101-4- CHN]; gene_2068; hinge residues; identified by MetaGeneAnnotator; putative; membrane-bound complex binding site [...]
   0.948
gluB
Glutamate ABC transporter substrate-binding protein; Bacterial extracellular solute-binding proteins, family 3; pfam00497; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic..; cd00134; COG: COG0834; gene_496; glutamate ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus ruminis ATCC 25644]; hinge residues; identified by MetaGeneAnnotator; putative; [...]
 
 0.939
BAP85854.1
ABC transporter signature motif; ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; COG1126; ATP binding site [chemical binding]; ATP-binding cassette domain of the histidine and glutamine transporters; cd03262; D-loop; H-loop/switch region; Q-loop/lid; Walker A/P-loop; Walker B; amino acid ABC transporter ATP-binding protein [Lactobacillus rhamnosus GG]; gene_1274; identified by MetaGeneAnnotator; putative; strain coidentity: ATCC 53103 = GG; synonym: Lactobacillus rhamnosus ATCC 53103.
 
 0.924
BAP84767.1
ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus vaginalis ATCC 49540]; ABC transporter signature motif; ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; COG1126; ATP binding site [chemical binding]; COG: COG1126; D-loop; H-loop/switch region; HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP..; cd03262; Q-loo [...]
 
 0.915
BAP86735.1
Glutamine ABC transporter ATP-binding protein; ABC transporter signature motif; ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; COG1126; ATP binding site [chemical binding]; ATP-binding cassette domain of the histidine and glutamine transporters; cd03262; COG1126 ABC-type polar amino acid transport system, ATPase component; D-loop; H-loop/switch region; Q-loop/lid; Walker A/P-loop; Walker B; gene_2155; identified by MetaGeneAnnotator; putative; phosphate ABC transporter ATP-binding protein [Lactobacillus coryniformis subsp. coryniform [...]
 
 0.882
BAP86646.1
ABC transporter signature motif; ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; COG1126; ATP binding site [chemical binding]; D-loop; H-loop/switch region; HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP..; cd03262; Q-loop/lid; Walker A/P-loop; Walker B; amino acid ABC transporter ATP-binding component [Lactobacillus fermentum 28-3- [...]
 
 0.871
glnQ3
Amino acid ABC transporter ATPase; ABC transporter signature motif; ATP binding site [chemical binding]; COG: COG1126; Pfam: PF00005; InterPro: IPR003593; D-loop; P-loop containing Nucleoside Triphosphate Hydrolases; cl09099; Q-loop/lid; Walker A/P-loop; Walker B; gene_1481; glutamine ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus antri DSM 16041]; identified by MetaGeneAnnotator; putative; putative bacteriocin export ABC transporter, lactococcin 972 group; TIGR03608.
 
 0.842
Your Current Organism:
Lactobacillus hokkaidonensis
NCBI taxonomy Id: 1291742
Other names: L. hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis LOOC260, Lactobacillus sp. LOOC260
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