STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP86538.1enoyl-CoA hydratase; Gene_1958; identified by MetaGeneAnnotator; putative. (146 aa)    
Predicted Functional Partners:
BAP86540.1
enoyl-CoA hydratase/isomerase; 3-hydroxybutyryl-CoA dehydratase; Validated; COG1024 Enoyl-CoA hydratase/carnithine racemase; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase; cd06558; enoyl-CoA hydratase/isomerase [Lactobacillus farciminis KCTC 3681]; gene_1960; identified by MetaGeneAnnotator; putative; oxyanion hole (OAH) forming residues; substrate binding site [chemical binding]; trim [...]
  
 0.967
ter
trans-2-enoyl-CoA reductase; COG3007 Uncharacterized paraquat-inducible protein B; Enoyl reductase FAD binding domain; pfam07055; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; pfam12242; Trans-2-enoyl-CoA reductase catalytic region; pfam12241; gene_1957; identified by MetaGeneAnnotator; putative; trans-2-enoyl-CoA reductase [Lactobacillus farciminis KCTC 3681]; trans-2-enoyl-CoA reductase; Provisional.
    
  0.953
BAP86536.1
Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid metabolism]; COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase; Coenzyme A transferase; smart00882; SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to..; cl00339; gene_1956; identified by MetaGeneAnnotator; putative; propionate CoA-transferase [Lactobacillus farciminis KCTC 3681].
 
     0.716
BAP86694.1
Acyl-CoA dehydrogenase; cl09933; Acyl-CoA dehydrogenases [Lipid metabolism]; COG1960; KEGG: lbr:LVIS_1909 1.0e-119 acyl-CoA dehydrogenase; K00248 butyryl-CoA dehydrogenase; Psort location: Cytoplasmic, score: 9.97; acyl-CoA dehydrogenase protein [Lactobacillus kisonensis F0435]; gene_2114; identified by MetaGeneAnnotator; putative.
 
 0.625
birA
biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.541
adhE
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD); cd08178; Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like; cd07122; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [Lactobacillus brevis ATCC 367]; bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional; gene_1976; identified by MetaGeneAnnotator; putative; metal binding site [ion binding]; putative active site [active]; putative catalytic cysteine [active].
  
  
 0.517
BAP86539.1
Asn-Pro-Ala signature motifs; Glycerol uptake facilitator protein [Lactobacillus pentosus KCA1]; Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal..; cd00333; amphipathic channel; gene_1959; identified by MetaGeneAnnotator; putative; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
   0.478
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.467
BAP86541.1
2-deoxy-D-gluconate 3-dehydrogenase; Gene_1961; identified by MetaGeneAnnotator; putative.
 
 0.464
BAP85340.1
Short-chain dehydrogenase; Rossmann-fold NAD(P)(+)-binding proteins; cl09931; Short-chain dehydrogenase/reductase SDR YhxC (fragment) [[Clostridium] sticklandii]; gene_760; identified by MetaGeneAnnotator; putative.
 
 0.426
Your Current Organism:
Lactobacillus hokkaidonensis
NCBI taxonomy Id: 1291742
Other names: L. hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis LOOC260, Lactobacillus sp. LOOC260
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