STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgm-3Beta-phosphoglucomutase; COG: COG0637; Pfam: PF00702; InterPro: IPR005834; Haloacid Dehalogenase-like Hydrolases; cl11391; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others; cd01427; beta-phosphoglucomutase [Weissella paramesenteroides ATCC 33313]; beta-phosphoglucomutase; TIGR01990; gene_2174; identified by MetaGeneAnnotator; putative; motif II. (221 aa)    
Predicted Functional Partners:
BAP86755.1
Maltose phosphorylase; Glycosyl hydrolase family 65 central catalytic domain; pfam03632; Glycosyl hydrolase family 65, C-terminal domain; pfam03633; Glycosyl hydrolase family 65, N-terminal domain; pfam03636; Maltose phosphorylase / Trehalose phosphorylase [Lactobacillus pentosus KCA1]; gene_2175; identified by MetaGeneAnnotator; putative; maltose phosphorylase; Provisional.
 
 0.999
BAP84894.1
Glycoside hydrolase; Gene_314; identified by MetaGeneAnnotator; putative.
 
 0.998
BAP85385.1
Kojibiose phosphorylase; COG0841 Cation/multidrug efflux pump; Glycosyl hydrolase family 65 central catalytic domain; pfam03632; Glycosyl hydrolase family 65, C-terminal domain; pfam03633; Glycosyl hydrolase family 65, N-terminal domain; pfam03636; Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]; COG1554; gene_805; glycosyl hydrolase [Lactobacillus coryniformis subsp. coryniformis KCTC 3167]; identified by MetaGeneAnnotator; putative.
  
 0.980
BAP85384.1
Beta-phosphoglucomutase; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others; cd01427; KEGG: lbr:LVIS_1518 7.1e-80 HAD family sugar phosphatase; K01838 beta-phosphoglucomutase; beta-phosphoglucomutase [Lactobacillus parafarraginis F0439]; beta-phosphoglucomutase; TIGR01990; gene_804; identified by MetaGeneAnnotator; putative; motif II.
  
  
 
0.902
BAP86756.1
Major Facilitator Superfamily; pfam07690; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of..; cd06174; gene_2176; identified by MetaGeneAnnotator; putative; lreu_v1_TGAC_scaffold_03; putative substrate translocation pore; sugar transport protein [Lactobacillus reuteri ATCC 53608].
  
    0.690
nagE
PTS N-acetylglucosamine transporter subunit IIABC; COG: COG1263; Pfam: PF02378,PF00367,PF00358; InterPro: IPR010974; HPr interaction site; PTS family N-acetylglucosamine porter, IIABC component [Lactobacillus plantarum subsp. plantarum ATCC 14917]; PTS system, N-acetylglucosamine-specific IIBC component; TIGR01998; PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family..; cd00212; Phosphotr [...]
  
  
 0.681
BAP86757.1
LacI family transcriptional regulator; Gene_2177; identified by MetaGeneAnnotator; putative.
 
     0.493
cls-2
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
  
   0.486
BAP86453.1
HAD family hydrolase; Gene_1873; identified by MetaGeneAnnotator; putative.
 
  
 0.403
Your Current Organism:
Lactobacillus hokkaidonensis
NCBI taxonomy Id: 1291742
Other names: L. hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis LOOC260, Lactobacillus sp. LOOC260
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