STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK47708.1Hypothetical protein; Gene_806; identified by MetaGeneAnnotator; putative. (141 aa)    
Predicted Functional Partners:
GAK47705.1
SLT domain containing protein; Gene_803; identified by MetaGeneAnnotator; putative.
       0.773
GAK47706.1
Hypothetical protein; Gene_804; identified by MetaGeneAnnotator; putative.
       0.773
pheS-2
phenylalanyl-tRNA synthetase; Gene_805; identified by MetaGeneAnnotator; putative.
       0.773
GAK47709.1
Hypothetical protein; Gene_807; identified by MetaGeneAnnotator; putative.
       0.763
GAK47710.1
Hypothetical protein; Gene_808; identified by MetaGeneAnnotator; putative.
       0.762
GAK47711.1
Hypothetical protein; Gene_809; identified by MetaGeneAnnotator; putative.
       0.762
GAK47712.1
Hypothetical protein; Gene_810; identified by MetaGeneAnnotator; putative.
       0.762
GAK47713.1
Non-ribosomal peptide synthetase; Gene_811; identified by MetaGeneAnnotator; putative.
       0.762
GAK47714.1
Soluble lytic murein transglycosylase; Gene_812; identified by MetaGeneAnnotator; putative.
       0.762
GAK47698.1
Hypothetical protein; Gene_796; identified by MetaGeneAnnotator; putative.
       0.516
Your Current Organism:
Lactobacillus oryzae
NCBI taxonomy Id: 1291743
Other names: L. oryzae JCM 18671, Lactobacillus oryzae JCM 18671, Lactobacillus oryzae SG293, Lactobacillus sp. JCM 18671, Lactobacillus sp. SG293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.