STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK47725.1Hypothetical protein; Gene_823; identified by MetaGeneAnnotator; putative. (77 aa)    
Predicted Functional Partners:
GAK47722.1
Alpha-mannosidase; Gene_820; identified by MetaGeneAnnotator; putative.
       0.539
GAK47723.1
Hypothetical protein; Gene_821; identified by MetaGeneAnnotator; putative.
       0.539
GAK47724.1
Hypothetical protein; Gene_822; identified by MetaGeneAnnotator; putative.
       0.539
GAK47726.1
Hypothetical protein; Gene_824; identified by MetaGeneAnnotator; putative.
       0.537
GAK47718.1
Phage Mu protein F like protein; Gene_816; identified by MetaGeneAnnotator; putative.
       0.462
GAK47719.1
Phage portal protein; Gene_817; identified by MetaGeneAnnotator; putative.
       0.462
GAK47720.1
Phage terminase large subunit [Lactobacillus brevis ATCC 367]; Phage terminase large subunit; cl12054; Terminase-like family; pfam03237; gene_818; identified by MetaGeneAnnotator; putative.
       0.462
GAK47721.1
Phage terminase small subunit; Gene_819; identified by MetaGeneAnnotator; putative.
       0.462
Your Current Organism:
Lactobacillus oryzae
NCBI taxonomy Id: 1291743
Other names: L. oryzae JCM 18671, Lactobacillus oryzae JCM 18671, Lactobacillus oryzae SG293, Lactobacillus sp. JCM 18671, Lactobacillus sp. SG293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.