STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK48244.1Hypothetical protein; Gene_1342; identified by MetaGeneAnnotator; putative. (226 aa)    
Predicted Functional Partners:
GAK48242.1
Adenine specific DNA methylase Mod; Possible site-specific DNA-methyltransferase [Lactobacillus salivarius CECT 5713]; Type III restriction/modification enzyme methylation subunit; pfam12564; gene_1340; identified by MetaGeneAnnotator; putative.
       0.774
GAK48243.1
DNA endonuclease, type III restriction and modification system; Gene_1341; identified by MetaGeneAnnotator; putative.
       0.773
GAK48245.1
Hypothetical protein; Gene_1343; identified by MetaGeneAnnotator; putative.
       0.715
GAK48241.1
Hypothetical protein; Gene_1339; identified by MetaGeneAnnotator; putative.
       0.558
Your Current Organism:
Lactobacillus oryzae
NCBI taxonomy Id: 1291743
Other names: L. oryzae JCM 18671, Lactobacillus oryzae JCM 18671, Lactobacillus oryzae SG293, Lactobacillus sp. JCM 18671, Lactobacillus sp. SG293
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.