STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
glnPH2Glutamine ABC transporter substrate-binding protein; ABC-ATPase subunit interface; ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; COG4215; Bacterial extracellular solute-binding proteins, family 3; pfam00497; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic..; cd00134; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-d [...] (480 aa)    
Predicted Functional Partners:
GAK48496.1
Peptide ABC transporter ATP-binding protein; ABC transporter signature motif; ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; COG1126; ABC-type polar amino acid transport system, ATPase component [Lactobacillus brevis ATCC 367]; ATP binding site [chemical binding]; D-loop; H-loop/switch region; HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of His [...]
 0.999
GAK48575.1
ABC transporter signature motif; ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; COG1126; ATP binding site [chemical binding]; ATP-binding cassette domain of the histidine and glutamine transporters; cd03262; D-loop; H-loop/switch region; Q-loop/lid; Walker A/P-loop; Walker B; amino acid ABC transporter ATP-binding protein [Lactobacillus rhamnosus GG]; gene_1673; identified by MetaGeneAnnotator; putative; strain coidentity: ATCC 53103 = GG; synonym: Lactobacillus rhamnosus ATCC 53103.
 0.993
GAK47668.1
Putative glutamine transport system ATP-binding protein; ABC transporter signature motif; ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; COG1126; ATP binding site [chemical binding]; D-loop; H-loop/switch region; HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP..; cd03262; Q-loop/lid; Walker A/P-loop; Walker B; amino acid ABC transpor [...]
 0.992
GAK47918.1
Amino acid ABC transporter ATPase; ABC transporter signature motif; ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]; COG1136; ATP binding site [chemical binding]; COG1126 ABC-type polar amino acid transport system, ATPase component; D-loop; H-loop/switch region; P-loop containing Nucleoside Triphosphate Hydrolases; cl09099; Q-loop/lid; Walker A/P-loop; Walker B; gene_1016; glutamine ABC transporter, ATP-binding protein [Lactobacillus coryniformis subsp. coryniformis KCTC 3167]; identified by MetaGeneAnnotator; putative.
 0.987
GAK47919.1
ABC-ATPase subunit interface; ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367]; ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; COG4215; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and..; cd06261; conserved gate region; dimer interface [polypeptide binding]; gene_1017; identified by MetaGeneAnnotato [...]
 
0.922
GAK48574.1
ABC transporter permease; ABC-ATPase subunit interface; ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; COG4215; Bacterial extracellular solute-binding proteins, family 3; pfam00497; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic..; cd00134; Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probabil [...]
 
0.889
GAK48360.1
ABC transporter periplasmic protein [Lactobacillus buchneri NRRL B- 30929]; Bacterial extracellular solute-binding proteins, family 3; pfam00497; Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and inorganic..; cd00134; KEGG: lbr:LVIS_1427 ABC-type amino acid transport system, periplasmic component; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, f [...]
 
0.841
GAK48361.1
Amino acid ABC transporter permease; ABC-ATPase subunit interface; ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; COG4215; KEGG: lbr:LVIS_1428 ABC-type amino acid transport system, permease component; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of t [...]
 
0.782
nagE
PTS family N-acetylglucosamine porter, IIABC component; COG: COG1263; Pfam: PF02378,PF00367,PF00358; InterPro: IPR010974; HPr interaction site; PTS family N-acetylglucosamine porter, IIABC component [Lactobacillus plantarum subsp. plantarum ATCC 14917]; PTS system, N-acetylglucosamine-specific IIBC component; TIGR01998; PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family..; cd00212; Phos [...]
     
 0.769
glnP1
Putative glutamine transport system permease protein; ABC-ATPase subunit interface; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and..; cd06261; conserved gate region; dimer interface [polypeptide binding]; gene_769; glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1]; identified by MetaGeneAnnotator; putative; putative PBP binding loops.
 
0.766
Your Current Organism:
Lactobacillus oryzae
NCBI taxonomy Id: 1291743
Other names: L. oryzae JCM 18671, Lactobacillus oryzae JCM 18671, Lactobacillus oryzae SG293, Lactobacillus sp. JCM 18671, Lactobacillus sp. SG293
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