STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
codYUnannotated protein; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. (258 aa)    
Predicted Functional Partners:
GCA_001311235_00395
Unannotated protein.
    
 
 0.702
RT41_GL000145
Unannotated protein.
    
 
 0.702
GCA_001311235_00869
Unannotated protein.
  
 
 
 0.689
rpoA
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.639
sepF
Unannotated protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
   
    0.638
RT41_GL000888
Unannotated protein.
  
  
 0.623
RT41_GL000069
Unannotated protein.
  
     0.618
RT41_GL000112
Unannotated protein.
  
   
 0.588
RT41_GL001438
Unannotated protein.
  
     0.567
GCA_001311235_00455
Unannotated protein.
  
   
 0.554
Your Current Organism:
Lactococcus fujiensis
NCBI taxonomy Id: 1291764
Other names: L. fujiensis JCM 16395, Lactococcus fujiensis DSM 27937, Lactococcus fujiensis JCM 16395, Lactococcus fujiensis NJ 317
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.