STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425625_02072Unannotated protein. (194 aa)    
Predicted Functional Partners:
GCA_000425625_00825
Unannotated protein.
  
     0.681
GCA_000425625_01368
Unannotated protein.
  
     0.669
GCA_000425625_02110
Unannotated protein.
  
     0.666
GCA_000425625_00306
Unannotated protein.
  
     0.665
GCA_000425625_01142
Unannotated protein.
  
     0.665
GCA_000425625_01630
Unannotated protein.
  
     0.653
GCA_000425625_02276
Unannotated protein.
  
     0.640
GCA_000425625_02011
Unannotated protein.
  
     0.639
GCA_000425625_02625
Unannotated protein.
  
     0.621
GCA_000425625_02081
Unannotated protein.
  
     0.620
Your Current Organism:
Pseudomonas azotifigens
NCBI taxonomy Id: 1292027
Other names: P. azotifigens DSM 17556, Pseudomonas azotifigens DSM 17556
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.