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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sojHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)    
Predicted Functional Partners:
parB
Plasmid partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
 
 
 0.934
noc
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
 
 
 0.869
KIR12570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
dnaA_3
Chromosomal replication initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.686
ffh_3
Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.543
KIR10393.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.541
KIR10337.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.541
KIR10300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.541
KIR10299.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.541
KIR10268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.541
Your Current Organism:
Staphylococcus gallinarum
NCBI taxonomy Id: 1293
Other names: ATCC 35539, CCM 3572, CCUG 15600, CIP 103504, DSM 20610, LMG 19121, LMG:19121, NCTC 12195, NRRL B-14763, S. gallinarum, strain VIII1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.