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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIR12381.1PalA; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
ycjS_2
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.946
KIR12383.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.943
KIR12380.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.911
KIR11894.1
Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.709
glvA
Alpha-galactosidase; Catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.572
yvaA_2
Quinolinate phosphoribosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.563
KIR12914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.553
KIR12722.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.549
KIR11895.1
Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.518
idhA
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.517
Your Current Organism:
Staphylococcus gallinarum
NCBI taxonomy Id: 1293
Other names: ATCC 35539, CCM 3572, CCUG 15600, CIP 103504, DSM 20610, LMG 19121, LMG:19121, NCTC 12195, NRRL B-14763, S. gallinarum, strain VIII1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.