STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIR12524.1DegV family EDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)    
Predicted Functional Partners:
KIR12087.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
yigZ
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
KIR12088.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.688
KIR12527.1
Sigma-54 modulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.665
KIR12525.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
KIR12526.1
Competence protein ComF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
rex_2
Redox-sensing transcriptional repressor rex; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.505
Your Current Organism:
Staphylococcus gallinarum
NCBI taxonomy Id: 1293
Other names: ATCC 35539, CCM 3572, CCUG 15600, CIP 103504, DSM 20610, LMG 19121, LMG:19121, NCTC 12195, NRRL B-14763, S. gallinarum, strain VIII1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.