| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KIR11686.1 | KIR11692.1 | SH09_04815 | SH09_04845 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
| KIR11686.1 | mreD | SH09_04815 | SH09_04820 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| KIR11686.1 | obgE | SH09_04815 | SH09_04840 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.618 |
| KIR11686.1 | queA_1 | SH09_04815 | SH09_04860 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.639 |
| KIR11686.1 | ruvA | SH09_04815 | SH09_04850 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.654 |
| KIR11686.1 | ruvB_3 | SH09_04815 | SH09_04855 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.624 |
| KIR11686.1 | secDF_2 | SH09_04815 | SH09_04875 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Preprotein translocase subunit SecD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
| KIR11686.1 | tgt_1 | SH09_04815 | SH09_04865 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.819 |
| KIR11686.1 | yajC | SH09_04815 | SH09_04870 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.694 |
| KIR11692.1 | KIR11686.1 | SH09_04845 | SH09_04815 | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.609 |
| KIR11692.1 | mreD | SH09_04845 | SH09_04820 | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
| KIR11692.1 | obgE | SH09_04845 | SH09_04840 | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.862 |
| KIR11692.1 | queA_1 | SH09_04845 | SH09_04860 | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.789 |
| KIR11692.1 | ruvA | SH09_04845 | SH09_04850 | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.848 |
| KIR11692.1 | ruvB_3 | SH09_04845 | SH09_04855 | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.789 |
| KIR11692.1 | secDF_2 | SH09_04845 | SH09_04875 | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.678 |
| KIR11692.1 | tgt_1 | SH09_04845 | SH09_04865 | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.758 |
| KIR11692.1 | yajC | SH09_04845 | SH09_04870 | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.741 |
| mreD | KIR11686.1 | SH09_04820 | SH09_04815 | Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.996 |
| mreD | KIR11692.1 | SH09_04820 | SH09_04845 | Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology. | ACT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
