Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KIR11339.1 | KIR11340.1 | SH09_08270 | SH09_08275 | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramate--alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
KIR11339.1 | ftnA | SH09_08270 | SH09_08280 | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferritin; Iron-storage protein. | 0.786 |
KIR11340.1 | KIR11339.1 | SH09_08275 | SH09_08270 | UDP-N-acetylmuramate--alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
KIR11340.1 | ftnA | SH09_08275 | SH09_08280 | UDP-N-acetylmuramate--alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferritin; Iron-storage protein. | 0.786 |
ahpC_4 | ftnA | SH09_00215 | SH09_08280 | With AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferritin; Iron-storage protein. | 0.655 |
ftnA | KIR11339.1 | SH09_08280 | SH09_08270 | Ferritin; Iron-storage protein. | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.786 |
ftnA | KIR11340.1 | SH09_08280 | SH09_08275 | Ferritin; Iron-storage protein. | UDP-N-acetylmuramate--alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.786 |
ftnA | ahpC_4 | SH09_08280 | SH09_00215 | Ferritin; Iron-storage protein. | With AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.655 |
ftnA | hemH_2 | SH09_08280 | SH09_12840 | Ferritin; Iron-storage protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.534 |
ftnA | polC_10 | SH09_08280 | SH09_08285 | Ferritin; Iron-storage protein. | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
ftnA | rpsP | SH09_08280 | SH09_06795 | Ferritin; Iron-storage protein. | 30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.527 |
hemH_2 | ftnA | SH09_12840 | SH09_08280 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | Ferritin; Iron-storage protein. | 0.534 |
polC_10 | ftnA | SH09_08285 | SH09_08280 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferritin; Iron-storage protein. | 0.532 |
rpsP | ftnA | SH09_06795 | SH09_08280 | 30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | Ferritin; Iron-storage protein. | 0.527 |