Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KIR11757.1 | ytfL_2 | SH09_05180 | SH09_11250 | rRNA maturation factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
KIR12602.1 | ytfL_2 | SH09_00145 | SH09_11250 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
guaA_1 | purA_1 | SH09_00165 | SH09_01310 | GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.927 |
guaA_1 | ytfL_2 | SH09_00165 | SH09_11250 | GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.834 |
mta_3 | ytfL_2 | SH09_14415 | SH09_11250 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
narL | ytfL_2 | SH09_01675 | SH09_11250 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.588 |
purA_1 | guaA_1 | SH09_01310 | SH09_00165 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.927 |
purA_1 | ytfL_2 | SH09_01310 | SH09_11250 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
ytfL_2 | KIR11757.1 | SH09_11250 | SH09_05180 | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | rRNA maturation factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
ytfL_2 | KIR12602.1 | SH09_11250 | SH09_00145 | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
ytfL_2 | guaA_1 | SH09_11250 | SH09_00165 | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.834 |
ytfL_2 | mta_3 | SH09_11250 | SH09_14415 | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
ytfL_2 | narL | SH09_11250 | SH09_01675 | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.588 |
ytfL_2 | purA_1 | SH09_11250 | SH09_01310 | Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.403 |