Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cdrCoA-disulfide reductase; NADPH-dependent; catalyzes the reduction of coenzyme A disulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)    
Predicted Functional Partners:
nasE
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.818
yidA_1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.805
soxA_2
Methyltryptophan oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.792
thiO
Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.792
rpsE
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.716
ftsH_1
Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
   
   0.714
KIR10790.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.696
upp
Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.694
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.684
atpD
ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.671
Your Current Organism:
Staphylococcus gallinarum
NCBI taxonomy Id: 1293
Other names: ATCC 35539, CCM 3572, CCUG 15600, CIP 103504, DSM 20610, LMG 19121, LMG:19121, NCTC 12195, NRRL B-14763, S. gallinarum, strain VIII1
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