STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAES_148890TBC1 domain family member 22B. (566 aa)    
Predicted Functional Partners:
AAES_05601
Ras-related protein Rab-1A.
    
 
 0.751
AAES_147496
28S ribosomal protein S6.
    
   0.722
AAES_44053
28S ribosomal protein S35.
    
   0.610
AAES_160460
39S ribosomal protein L41.
   
   0.608
AAES_158619
Ras-related and estrogen-regulated growth inhibitor-like protein.
    
 
 0.599
AAES_245980
28S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.599
AAES_139469
Tubulin_3 domain-containing protein.
    
   0.596
AAES_85606
28S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
   0.596
AAES_161689
39S ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
    
   0.596
AAES_129444
39S ribosomal protein L43.
    
   0.596
Your Current Organism:
Amazona aestiva
NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon
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