STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAES_169048SMARCAD1-like protein. (917 aa)    
Predicted Functional Partners:
AAES_31139
E3 ubiquitin-protein ligase TRIM33.
   
 
 0.926
AAES_79001
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.849
AAES_61350
Uncharacterized protein.
    
 
 0.805
AAES_112516
Transcription intermediary factor 1-alpha.
   
 
 0.761
AAES_135518
Histone H2A deubiquitinase MYSM1.
   
 
 0.601
AAES_210965
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.601
AAES_03745
Werner syndrome ATP-dependent helicase.
   
 
 0.597
AAES_163035
Tumor suppressor p53-binding protein 1 isoform X4.
   
 
 0.594
AAES_44562
DNA topoisomerase 2-binding protein 1.
   
 
 0.585
AAES_61901
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.519
Your Current Organism:
Amazona aestiva
NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon
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