STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAES_164183E3 ubiquitin-protein ligase TRIM36-like protein. (128 aa)    
Predicted Functional Partners:
AAES_164172
E3 ubiquitin-protein ligase TRIM36.
 
      0.802
AAES_73528
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.603
AAES_24382
Microtubule-associated protein RP/EB family member 2 isoform X1.
    
 0.587
AAES_139325
Tripartite motif-containing protein 46.
 
      0.521
AAES_135649
Ensconsin.
    
 
 0.501
AAES_203339
CLIP-associating protein 2-like protein.
    
 
 0.497
AAES_139342
Thrombospondin-3.
    
 0.474
AAES_15825
Fn3_like domain-containing protein.
    
 
 0.474
AAES_115397
PH domain-containing protein.
    
 0.471
AAES_115410
PH domain leucine-rich repeat-containing protein phosphatase 2.
    
 0.471
Your Current Organism:
Amazona aestiva
NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.