STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAES_156779tRNA dimethylallyltransferase, isoform X3; Belongs to the IPP transferase family. (423 aa)    
Predicted Functional Partners:
AAES_04539
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
    
 0.909
AAES_141031
Isopentenyl-diphosphate Delta-isomerase 1.
    
 0.903
AAES_127698
Putative GTP-binding protein 6.
  
  
 0.864
AAES_39087
Uncharacterized protein.
  
 
 0.819
AAES_39079
Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
  
 
 0.819
AAES_35086
Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
  
 
 0.809
AAES_33593
FtsJ domain-containing protein.
  
  
 0.771
AAES_33599
Pre-rRNA processing protein FTSJ3.
  
  
 0.771
AAES_176721
Putative ribosomal rRNA methyltransferase 2.
  
  
 0.771
AAES_170854
Putative ribonuclease.
  
  
 0.763
Your Current Organism:
Amazona aestiva
NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.