STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAES_86787Putative ATP-dependent RNA helicase DHX40. (652 aa)    
Predicted Functional Partners:
AAES_108809
BCL-6 corepressor-like 1.
   
 0.893
AAES_20686
Something about silencing protein 10.
   
 0.888
AAES_108380
Pre-mRNA-splicing factor SLU7 isoform X1.
   
 0.884
AAES_41300
U3 small nucleolar ribonucleoprotein IMP3-like protein.
   
  0.883
AAES_168649
U3 small nucleolar RNA-associated protein 18 isoform X1.
   
 0.876
AAES_21544
Pre-mRNA-splicing factor CWC22.
   
 0.875
AAES_04843
Nucleolar protein 6.
   
  0.873
AAES_146046
Pre-mRNA-splicing factor syf2-like protein.
    
 0.871
AAES_126864
Putative ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family.
  
 0.871
AAES_247475
Nucleolar protein 14.
 
 
  0.864
Your Current Organism:
Amazona aestiva
NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.