AAES_99166 protein (Amazona aestiva) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AAES_99166

Core-binding factor, runt domain, alpha subunit 2. (481 aa)

Predicted Functional Partners:

AAES_107691

0.846

AAES_92882

0.845

AAES_21390

0.844

AAES_113957

0.842

AAES_42394

0.842

AAES_127795

0.832

AAES_19665

0.826

AAES_57772

0.794

AAES_15193

0.792

MED17

0.785

Your Current Organism:

Amazona aestiva

NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAES_107691	AAES_99166	A0A0Q3PSS1	A0A0Q3PVG2	CS domain-containing protein.	Core-binding factor, runt domain, alpha subunit 2.	0.846
AAES_113957	AAES_19665	A0A0Q3M822	A0A0Q3X6V6	Transcription factor PU.1 isoform X2.	CCAAT/enhancer-binding protein.	0.747
AAES_113957	AAES_99166	A0A0Q3M822	A0A0Q3PVG2	Transcription factor PU.1 isoform X2.	Core-binding factor, runt domain, alpha subunit 2.	0.842
AAES_127795	AAES_15193	A0A0Q3UR16	A0A0Q3U1M6	N-acetylserotonin O-methyltransferase-like protein isoform X1.	Acyl-CoA synthetase family member 4 isoform X3.	0.540
AAES_127795	AAES_42394	A0A0Q3UR16	A0A0Q3MRS9	N-acetylserotonin O-methyltransferase-like protein isoform X1.	C2H2-type domain-containing protein.	0.458
AAES_127795	AAES_99166	A0A0Q3UR16	A0A0Q3PVG2	N-acetylserotonin O-methyltransferase-like protein isoform X1.	Core-binding factor, runt domain, alpha subunit 2.	0.832
AAES_15193	AAES_127795	A0A0Q3U1M6	A0A0Q3UR16	Acyl-CoA synthetase family member 4 isoform X3.	N-acetylserotonin O-methyltransferase-like protein isoform X1.	0.540
AAES_15193	AAES_42394	A0A0Q3U1M6	A0A0Q3MRS9	Acyl-CoA synthetase family member 4 isoform X3.	C2H2-type domain-containing protein.	0.539
AAES_15193	AAES_92882	A0A0Q3U1M6	A0A0Q3R5P3	Acyl-CoA synthetase family member 4 isoform X3.	Cytochrome b5 reductase 4-like isoform X1.	0.514
AAES_15193	AAES_99166	A0A0Q3U1M6	A0A0Q3PVG2	Acyl-CoA synthetase family member 4 isoform X3.	Core-binding factor, runt domain, alpha subunit 2.	0.792
AAES_19665	AAES_113957	A0A0Q3X6V6	A0A0Q3M822	CCAAT/enhancer-binding protein.	Transcription factor PU.1 isoform X2.	0.747
AAES_19665	AAES_99166	A0A0Q3X6V6	A0A0Q3PVG2	CCAAT/enhancer-binding protein.	Core-binding factor, runt domain, alpha subunit 2.	0.826
AAES_21390	AAES_99166	A0A0Q3X7H9	A0A0Q3PVG2	Phospholipase A2.	Core-binding factor, runt domain, alpha subunit 2.	0.844
AAES_42394	AAES_127795	A0A0Q3MRS9	A0A0Q3UR16	C2H2-type domain-containing protein.	N-acetylserotonin O-methyltransferase-like protein isoform X1.	0.458
AAES_42394	AAES_15193	A0A0Q3MRS9	A0A0Q3U1M6	C2H2-type domain-containing protein.	Acyl-CoA synthetase family member 4 isoform X3.	0.539
AAES_42394	AAES_92882	A0A0Q3MRS9	A0A0Q3R5P3	C2H2-type domain-containing protein.	Cytochrome b5 reductase 4-like isoform X1.	0.955
AAES_42394	AAES_99166	A0A0Q3MRS9	A0A0Q3PVG2	C2H2-type domain-containing protein.	Core-binding factor, runt domain, alpha subunit 2.	0.842
AAES_57772	AAES_99166	A0A0Q3PR90	A0A0Q3PVG2	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Core-binding factor, runt domain, alpha subunit 2.	0.794
AAES_57772	MED17	A0A0Q3PR90	A0A0Q3PSX0	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.999
AAES_92882	AAES_15193	A0A0Q3R5P3	A0A0Q3U1M6	Cytochrome b5 reductase 4-like isoform X1.	Acyl-CoA synthetase family member 4 isoform X3.	0.514