AAES_79091 protein (Amazona aestiva) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AAES_79091

Homeobox protein SEBOX. (166 aa)

Predicted Functional Partners:

AAES_129224

0.598

AAES_00941

0.598

AAES_00938

0.598

AAES_118365

0.535

AAES_06158

0.535

AAES_202947

0.534

AAES_85074

0.493

AAES_35529

0.493

AAES_25138

0.490

AAES_18068

0.490

Your Current Organism:

Amazona aestiva

NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAES_00938	AAES_00941	A0A0Q3XAT8	A0A0Q3X2L7	LIM domain-binding protein 2-like protein.	LIM domain-binding protein 2 isoform X5.	0.494
AAES_00938	AAES_06158	A0A0Q3XAT8	A0A0Q3XB55	LIM domain-binding protein 2-like protein.	Transcription factor 12 isoform X1.	0.696
AAES_00938	AAES_118365	A0A0Q3XAT8	A0A0Q3URD6	LIM domain-binding protein 2-like protein.	Transcription factor E2-alpha.	0.696
AAES_00938	AAES_18068	A0A0Q3XAT8	A0A0Q3X8N2	LIM domain-binding protein 2-like protein.	LIM/homeobox protein Lhx4.	0.705
AAES_00938	AAES_25138	A0A0Q3XAT8	A0A0Q3X2U7	LIM domain-binding protein 2-like protein.	LIM/homeobox protein Lhx3.	0.705
AAES_00938	AAES_35529	A0A0Q3XAT8	A0A0Q3RZ75	LIM domain-binding protein 2-like protein.	Transcription factor GATA-5.	0.641
AAES_00938	AAES_79091	A0A0Q3XAT8	A0A0Q3Q0B4	LIM domain-binding protein 2-like protein.	Homeobox protein SEBOX.	0.598
AAES_00938	AAES_85074	A0A0Q3XAT8	A0A0Q3PYM7	LIM domain-binding protein 2-like protein.	Transcription factor GATA-4 isoform X1.	0.641
AAES_00941	AAES_00938	A0A0Q3X2L7	A0A0Q3XAT8	LIM domain-binding protein 2 isoform X5.	LIM domain-binding protein 2-like protein.	0.494
AAES_00941	AAES_06158	A0A0Q3X2L7	A0A0Q3XB55	LIM domain-binding protein 2 isoform X5.	Transcription factor 12 isoform X1.	0.696
AAES_00941	AAES_118365	A0A0Q3X2L7	A0A0Q3URD6	LIM domain-binding protein 2 isoform X5.	Transcription factor E2-alpha.	0.696
AAES_00941	AAES_18068	A0A0Q3X2L7	A0A0Q3X8N2	LIM domain-binding protein 2 isoform X5.	LIM/homeobox protein Lhx4.	0.705
AAES_00941	AAES_25138	A0A0Q3X2L7	A0A0Q3X2U7	LIM domain-binding protein 2 isoform X5.	LIM/homeobox protein Lhx3.	0.705
AAES_00941	AAES_35529	A0A0Q3X2L7	A0A0Q3RZ75	LIM domain-binding protein 2 isoform X5.	Transcription factor GATA-5.	0.641
AAES_00941	AAES_79091	A0A0Q3X2L7	A0A0Q3Q0B4	LIM domain-binding protein 2 isoform X5.	Homeobox protein SEBOX.	0.598
AAES_00941	AAES_85074	A0A0Q3X2L7	A0A0Q3PYM7	LIM domain-binding protein 2 isoform X5.	Transcription factor GATA-4 isoform X1.	0.641
AAES_06158	AAES_00938	A0A0Q3XB55	A0A0Q3XAT8	Transcription factor 12 isoform X1.	LIM domain-binding protein 2-like protein.	0.696
AAES_06158	AAES_00941	A0A0Q3XB55	A0A0Q3X2L7	Transcription factor 12 isoform X1.	LIM domain-binding protein 2 isoform X5.	0.696
AAES_06158	AAES_129224	A0A0Q3XB55	A0A0Q3P8K5	Transcription factor 12 isoform X1.	LIM domain-binding protein 1 isoform X2.	0.696
AAES_06158	AAES_35529	A0A0Q3XB55	A0A0Q3RZ75	Transcription factor 12 isoform X1.	Transcription factor GATA-5.	0.501