STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAES_20075Rho GTPase-activating protein 39. (833 aa)    
Predicted Functional Partners:
AAES_20069
WW domain-containing protein.
 
      0.899
AAES_15266
Uncharacterized protein.
    
 0.874
AAES_103743
Rhomboid-related protein 3; Belongs to the peptidase S54 family.
    
 0.647
AAES_70600
WD repeat-containing protein 18.
   
 0.620
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.616
AAES_128651
Cell division cycle 42.
    
 0.607
AAES_75471
Testis-expressed sequence 10 protein isoform X3.
    
 0.602
AAES_10951
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.595
AAES_168878
Lamin; Belongs to the intermediate filament family.
    
  0.594
AAES_116972
Lamin-B1; Belongs to the intermediate filament family.
    
  0.594
Your Current Organism:
Amazona aestiva
NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon
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