STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAES_100998snRNA-activating protein complex subunit 3. (348 aa)    
Predicted Functional Partners:
AAES_201321
snRNA-activating protein complex subunit 4.
    
 0.999
AAES_37489
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.983
AAES_60357
snRNA-activating protein complex subunit 5.
    
 0.948
AAES_153774
Transcription initiation factor IIB.
    
 0.938
AAES_120061
Transcription initiation factor IIA subunit 1.
    
  0.923
AAES_74873
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
 0.899
AAES_75265
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
  0.893
AAES_70494
NA directed RNA polymerase II polypeptide E.
    
  0.890
AAES_97767
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
  0.883
AAES_155765
TATA-box-binding protein.
   
 0.875
Your Current Organism:
Amazona aestiva
NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.