STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAES_16477Pumilio 1 isoform X4. (1189 aa)    
Predicted Functional Partners:
AAES_99746
Cyclin-G-associated kinase.
   
 0.974
AAES_119544
Ectodysplasin-A receptor-associated adapter protein.
   
 
 0.962
AAES_66786
Ataxin-1 isoform X1.
     
 0.803
AAES_115372
Ataxin-1-like protein.
     
 0.797
AAES_04284
Cytochrome c oxidase copper chaperone.
    
 
 0.792
AAES_57450
CCR4-NOT transcription complex subunit 7 isoform X4.
    
 
 0.729
AAES_08808
CCR4-NOT transcription complex subunit 8.
    
 
 0.719
AAES_47213
Clathrin interactor 1 isoform X2.
   
 
 0.703
AAES_16697
Tyrosine--tRNA ligase.
    
 
 0.671
RPSA
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.
    
  0.640
Your Current Organism:
Amazona aestiva
NCBI taxonomy Id: 12930
Other names: A. aestiva, blue-fronted amazon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.