STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFR87_10615Unannotated protein. (209 aa)    
Predicted Functional Partners:
alaS
Unannotated protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
 
     0.882
rpl12
Unannotated protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family.
       0.765
rpl10
Unannotated protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
       0.761
rpl1
Unannotated protein; Binds directly to 23S rRNA. Probably involved in E site tRNA release.
       0.687
GCA_001315825_00473
Unannotated protein.
       0.687
rpl11
Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.
       0.618
DFR87_04315
Unannotated protein.
  
    0.468
spt5
Unannotated protein; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.
 
     0.467
DFR87_02705
Unannotated protein.
  
     0.427
DFR87_07325
Unannotated protein.
  
    0.425
Your Current Organism:
Metallosphaera hakonensis
NCBI taxonomy Id: 1293036
Other names: M. hakonensis JCM 8857 = DSM 7519, Metallosphaera hakonensis DSM 7519, Metallosphaera hakonensis DSM 7519 = JCM 8857, Metallosphaera hakonensis HO1-1, Metallosphaera hakonensis JCM 8857, Metallosphaera hakonensis JCM 8857 = DSM 7519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.