STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455365_00155Unannotated protein. (185 aa)    
Predicted Functional Partners:
GCA_000455365_00041
Unannotated protein.
 
 0.999
GCA_000455365_01126
Unannotated protein.
 
 
 0.997
GCA_000455365_00902
Unannotated protein.
 
  
 0.992
GCA_000455365_01407
Unannotated protein.
 
 
 0.967
GCA_000455365_01784
Unannotated protein.
 
 
 0.940
GCA_000455365_00904
Unannotated protein.
 
  
 0.925
GCA_000455365_02455
Unannotated protein.
 
 
 0.921
GCA_000455365_00235
Unannotated protein.
  
 
 0.909
GCA_000455365_01499
Unannotated protein.
  
 
 0.909
GCA_000455365_01719
Unannotated protein.
  
 
 0.909
Your Current Organism:
Halopiger djelfimassiliensis
NCBI taxonomy Id: 1293047
Other names: CSUR P3035, DSM 27506, H. djelfimassiliensis, Halopiger djelfamassiliensis, Halopiger djelfimassiliensis corrig. Hassani et al. 2016, Halopiger sp. IIH2, strain IIH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.