STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455365_03146Unannotated protein. (685 aa)    
Predicted Functional Partners:
GCA_000455365_03145
Unannotated protein.
 0.998
GCA_000455365_03149
Unannotated protein.
 0.995
GCA_000455365_01196
Unannotated protein.
 0.993
GCA_000455365_01691
Unannotated protein.
    
  0.503
GCA_000455365_00684
Unannotated protein.
    
  0.500
GCA_000455365_02001
Unannotated protein.
     
 0.499
GCA_000455365_02276
Unannotated protein.
   
 
  0.493
GCA_000455365_03147
Unannotated protein.
       0.460
GCA_000455365_01926
Unannotated protein.
   
 
  0.433
GCA_000455365_03380
Unannotated protein.
   
 
  0.433
Your Current Organism:
Halopiger djelfimassiliensis
NCBI taxonomy Id: 1293047
Other names: CSUR P3035, DSM 27506, H. djelfimassiliensis, Halopiger djelfamassiliensis, Halopiger djelfimassiliensis corrig. Hassani et al. 2016, Halopiger sp. IIH2, strain IIH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.