STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455345_02899Unannotated protein. (379 aa)    
Predicted Functional Partners:
GCA_000455345_02491
Unannotated protein.
  
 
 0.950
GCA_000455345_01814
Unannotated protein.
 
 0.927
GCA_000455345_02782
Unannotated protein.
 
 
0.898
GCA_000455345_02900
Unannotated protein.
       0.818
GCA_000455345_02445
Unannotated protein.
  
  
 
0.780
GCA_000455345_03625
Unannotated protein.
  
 
 0.769
GCA_000455345_03485
Unannotated protein.
    
 0.753
GCA_000455345_02527
Unannotated protein.
  
  
 0.725
GCA_000455345_02898
Unannotated protein.
       0.647
GCA_000455345_03164
Unannotated protein.
  
  
 
0.644
Your Current Organism:
Halopiger goleimassiliensis
NCBI taxonomy Id: 1293048
Other names: CSUR P3036, DSM 27562, H. goleimassiliensis, Halopiger goleamassiliensis, Halopiger goleimassiliensis corrig. Hassani et al. 2016, Halopiger sp. IIH3, strain IIH3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.