STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455345_03001Unannotated protein. (383 aa)    
Predicted Functional Partners:
GCA_000455345_03617
Unannotated protein.
  
 0.582
GCA_000455345_01413
Unannotated protein.
  
 0.564
GCA_000455345_03769
Unannotated protein.
   
   0.528
GCA_000455345_03892
Unannotated protein.
   
   0.528
GCA_000455345_03002
Unannotated protein.
       0.523
GCA_000455345_00962
Unannotated protein.
    
   0.510
GCA_000455345_02848
Unannotated protein.
    
   0.510
GCA_000455345_01398
Unannotated protein.
  
 
 0.503
GCA_000455345_01051
Unannotated protein.
   
 
 0.474
GCA_000455345_02735
Unannotated protein.
 
 
  0.462
Your Current Organism:
Halopiger goleimassiliensis
NCBI taxonomy Id: 1293048
Other names: CSUR P3036, DSM 27562, H. goleimassiliensis, Halopiger goleamassiliensis, Halopiger goleimassiliensis corrig. Hassani et al. 2016, Halopiger sp. IIH3, strain IIH3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.