STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCU81083.1Pseudouridine kinase. (382 aa)    
Predicted Functional Partners:
psuG
Pseudouridine 5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
 
 0.999
CCU79946.1
Pyruvate-flavodoxin oxidoreductase.
    
 0.908
CCU77735.1
PTS system, glucose-specific IIC component / PTS system, glucose-specific IIB component / PTS system, glucose-specific IIA component.
  
 
 0.880
CCU80984.1
PTS system, mannose-specific IIB component / PTS system, mannose-specific IIC component / PTS system, mannose-specific IIA component.
  
 
 0.834
CCU77822.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.791
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
 0.788
CCU80938.1
Sorbitol dehydrogenase.
  
 
 0.776
CCU77860.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.775
CCU80609.1
2-oxoglutarate oxidoreductase, alpha subunit.
    
 0.768
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.761
Your Current Organism:
Halanaerobium saccharolyticum
NCBI taxonomy Id: 1293054
Other names: H. saccharolyticum subsp. saccharolyticum DSM 6643, Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643, Halanaerobium saccharolyticum subsp. saccharolyticum Z-7787
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