Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMX83008.1 | AMX83010.1 | GS3922_04520 | GS3922_04530 | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.947 |
| AMX83008.1 | AMX83013.1 | GS3922_04520 | GS3922_04545 | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.730 |
| AMX83008.1 | AMX83014.1 | GS3922_04520 | GS3922_04550 | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | Stage V sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.730 |
| AMX83008.1 | AMX83015.1 | GS3922_04520 | GS3922_04555 | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | SpoVA protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.653 |
| AMX83008.1 | AMX83017.1 | GS3922_04520 | GS3922_04565 | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | Stage V sporulation protein AF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.633 |
| AMX83008.1 | AMX83272.1 | GS3922_04520 | GS3922_06020 | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.579 |
| AMX83008.1 | AMX83684.1 | GS3922_04520 | GS3922_08440 | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.804 |
| AMX83008.1 | AMX84638.1 | GS3922_04520 | GS3922_13830 | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.804 |
| AMX83008.1 | AMX85013.1 | GS3922_04520 | GS3922_16125 | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | Anti-sigma B factor RsbW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.936 |
| AMX83008.1 | spoIIAB | GS3922_04520 | GS3922_04525 | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.999 |
| AMX83010.1 | AMX83008.1 | GS3922_04530 | GS3922_04520 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | 0.947 |
| AMX83010.1 | AMX83013.1 | GS3922_04530 | GS3922_04545 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.846 |
| AMX83010.1 | AMX83014.1 | GS3922_04530 | GS3922_04550 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.845 |
| AMX83010.1 | AMX83015.1 | GS3922_04530 | GS3922_04555 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | SpoVA protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.811 |
| AMX83010.1 | AMX83017.1 | GS3922_04530 | GS3922_04565 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.829 |
| AMX83010.1 | AMX83272.1 | GS3922_04530 | GS3922_06020 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| AMX83010.1 | AMX83684.1 | GS3922_04530 | GS3922_08440 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.771 |
| AMX83010.1 | AMX84638.1 | GS3922_04530 | GS3922_13830 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.771 |
| AMX83010.1 | AMX85013.1 | GS3922_04530 | GS3922_16125 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-sigma B factor RsbW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.919 |
| AMX83010.1 | spoIIAB | GS3922_04530 | GS3922_04525 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.998 |
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