STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMX83069.1Spore coat protein CotJC; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)    
Predicted Functional Partners:
AMX83070.1
Spore coat protein CotJB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.985
AMX83071.1
Spore coat protein CotJA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
AMX83092.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.690
AMX85104.1
Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.641
AMX83014.1
Stage V sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
AMX85021.1
Spore coat protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.577
AMX82882.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
  
 0.576
AMX83030.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.576
AMX83957.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.563
AMX83013.1
Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.560
Your Current Organism:
Geobacillus subterraneus
NCBI taxonomy Id: 129338
Other names: AS 12673, DSM 13552, Geobacillus subterraneus Nazina et al. 2001 emend. Poli et al. 2013, KCTC 3922, VKM B-2226, strain 34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.